Index

Symbols

--chunk-size zarr_rechunk command line option --in-memory zarr_rechunk command line option --log-level zarr_info command line option zarr_rechunk command line option

--recompress zarr_rechunk command line option --show zarr_info command line option --version zarr_info command line option zarr_rechunk command line option

B

bin_shrink() (in module pytools.utils.zarr)

build_pyramid() (in module pytools.utils.zarr)

C

compute_histogram() (pytools.utils.histogram.DaskHistogramHelper method)

D

DaskHistogramHelper (class in pytools.utils.histogram)

dims (pytools.HedwigZarrImage property)

E

extract_2d() (pytools.HedwigZarrImage method)

F

file_to_uint8() (in module pytools.convert)

G

get_series_keys() (pytools.HedwigZarrImages method)

group() (pytools.HedwigZarrImages method)

H

HedwigZarrImage (class in pytools) HedwigZarrImages (class in pytools)

histogram_robust_stats() (in module pytools.utils.histogram) histogram_stats() (in module pytools.utils.histogram) HistogramBase (class in pytools.utils.histogram)

I

INPUT_ZARR zarr_info command line option zarr_rechunk command line option

is_16bit() (in module pytools.meta) is_int16() (in module pytools.meta)

M

module pytools pytools.convert pytools.meta pytools.utils.histogram pytools.utils.zarr pytools.zarr_build_multiscales pytools.zarr_rechunk

N

neuroglancer_shader_parameters() (pytools.HedwigZarrImage method)

O

ome_info (pytools.HedwigZarrImages property)

ome_roi_model() (pytools.HedwigZarrImage method) ome_xml_path (pytools.HedwigZarrImages property)

P

path (pytools.HedwigZarrImage property) pytools module pytools.convert module pytools.meta module

pytools.utils.histogram module pytools.utils.zarr module pytools.zarr_build_multiscales module pytools.zarr_rechunk module

R

rechunk() (pytools.HedwigZarrImage method)

S

series() (pytools.HedwigZarrImages method) shader_type (pytools.HedwigZarrImage property)

shape (pytools.HedwigZarrImage property) spacing (pytools.HedwigZarrImage property)

U

units (pytools.HedwigZarrImage property)

V

visual_min_max() (in module pytools)

W

weighted_quantile() (in module pytools.utils.histogram)

Z

zarr_extract_2d() (in module pytools) zarr_info command line option --log-level --show --version INPUT_ZARR zarr_rechunk command line option --chunk-size --in-memory --log-level --recompress --version INPUT_ZARR

ZARRHistogramHelper (class in pytools.utils.histogram)