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HDStIM()
- HDStIM: High Dimensional Stimulation Immune Mapping
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chi11
- Sample data set for CyTOF Stimulation Assay
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marker_ranking_boruta()
- Marker Ranking by Boruta
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plot_K_Fisher()
- Diagnostic plots explaining K-means clustering and Fisher's exact test carried out by HDStIM
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plot_exprs()
- Diagnostic plots showing individual marker distribution before and after mapping by HDStIM
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plot_marker_ranking_heatmap()
- Marker ranking heatmap
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plot_umap()
- Diagnostic UMAP plots showing the partitioning of cells into responding and non-responding groups by HDStIM